Publications

 

2018

Brian Munsky, Guoliang Li, Zachary Fox, Douglas P Shepherd, Gregor Neuert, Distribution shapes govern the discovery of predictive models for gene regulation, Proceedings of the National Academy of Sciences of the United States of America, epub ahead of print 201806060

Elizabeth Gould, Nicolas Busquet, Douglas P Shepherd, Robert Dietz, Paco Herson, Fabio Simoes de Souza, Anan Li, Nicolas George, Diego Restrepo, Wendy Macklin, Mild Myelin Disruption Elicits Early Alteration in Behavior and Proliferation in the Subventricular Zone, eLife e43783

2017

Duncan P Ryan, Elizabeth A Gould, Gregory J Seedorf, Omid Masihzadeh, Steven H Abman, Sukumar Vijayaraghavan, Wendy B Macklin, Diego Restrepo, Douglas P Shepherd, Automatic and adaptive refractive index compensation for light-sheet microscopy, Nature Communications 612

Jasmine N Singh, Taylor M Nowlin, Gregory J Seedorf, Steven H Abman, Douglas P Shepherd, Quantifying three-dimensional rodent retina vascular development using optical tissue clearing and light-sheet microscopy, Journal of Biomedical Optics 22(7) 076011

Megan A Ahern, Claudine P Black, Gregory J Seedorf, Christopher D Baker, Douglas P Shepherd, Hyperoxia impairs pro-angiogenic RNA production in preterm endothelial colony-forming cells, AIMS Biophysics 4(2): 284-297

2015

Koushik Ghosh, Eva Rose M Balog, Jennifer L Kahn, Douglas P Shepherd, Jennifer S Martinez, Reginaldo C Rocha, Multicolor Luminescence from Conjugates of Genetically Encoded Elastin‐like Polymers and Terpyridine‐Lanthanides, Macromolecular Chemistry and Physics 216(18): 1856-1861

Douglas Shepherd, Life away from the coverslip. Comment on” Extracting physics of life at the molecular level: A review of single-molecule data analyses” by W. Colomb and SK Sarkar Physics of Life Reviews 13: 144-145

2014

Christa Brelsford, Douglas Shepherd, Using mixture-tuned match filtering to measure changes in subpixel vegetation area in Las Vegas, Nevada, Journal of Applied Remote Sensing 8(1): 083660

Evan P Perillo, Leyma De Haro, Mary E Phipps, Jennifer S Martinez, Hsin-Chih Yeh, Andrew K Dunn, Douglas P Shepherd, James H Werner, Enhanced 3D localization of individual RNA transcripts via astigmatic imaging, Proceedings Volume 8950, Single Molecule Spectroscopy and Superresolution Imaging VII 895003

2013

Douglas P Shepherd, Nan Li, Sofiya N Micheva-Viteva, Brian Munsky, Elizabeth Hong-Geller, James H Werner, Counting small RNA in pathogenic bacteria, Analytical Chemistry 85(10): 4938-4943 *Featured on journal cover*

2012

Douglas P Shepherd, Nan Li, Elizabeth Hong-Geller, Brian Munsky, James H Werner, New tools for discovering the role sRNA plays in cellular regulation, Proceedings Volume 8228, Single Molecule Spectroscopy and Superresolution Imaging V 822808

Douglas P Shepherd, Justin B Sambur, Yong-Qi Liang, Bruce A Parkinson, Alan Van Orden, In Situ Studies of Photoluminescence Quenching and Photocurrent Yield in Quantum Dot Sensitized Single Crystal TiO2 and ZnO Electrodes, The Journal of Physical Chemistry C 116(39): 21069-21076

2010

Douglas P Shepherd, Kevin J Whitcomb, Kenneth K Milligan, Peter M Goodwin, Martin P Gelfand, Alan Van Orden, Fluorescence intermittency and energy transfer in small clusters of semiconductor quantum dots, The Journal of Physical Chemistry C 114(35): 14831-14837